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  "Title": "Survival Analysis of Time Varying Coefficients Using a\nTree-Based Approach",
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  "Date": "2018-03-12",
  "Authors@R": "c(\nperson(\"Sudeshna\", \"Adak\", role = \"aut\"),\nperson(\"Ronghui\", \"Xu\", role = \"aut\"),\nperson(\"Euyhyun\", \"Lee\", role = c(\"trl\", \"cre\"),email = \"e4lee@ucsd.edu\"),\nperson(\"Steven\", \"Edland\", role = \"ctb\"),\nperson(\"Lon\", \"White\", role = \"ctb\"))",
  "Description": "Estimates time varying regression effects under Cox type\nmodels in survival data using classification and regression\ntree. The codes in this package were originally written in\nS-Plus for the paper \"Survival Analysis with Time-Varying\nRegression Effects Using a Tree-Based Approach,\" by Xu, R. and\nAdak, S. (2002) <doi:10.1111/j.0006-341X.2002.00305.x>,\nBiometrics, 58: 305-315. Development of this package was\nsupported by NIH grants AG053983 and AG057707, and by the UCSD\nAltman Translational Research Institute, NIH grant UL1TR001442.\nThe content is solely the responsibility of the authors and\ndoes not necessarily represent the official views of the NIH.\nThe example data are from the Honolulu Heart Program/Honolulu\nAsia Aging Study (HHP/HAAS).",
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    "User": "root"
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  "Author": "Sudeshna Adak [aut], Ronghui Xu [aut], Euyhyun Lee [trl, cre],\nSteven Edland [ctb], Lon White [ctb]",
  "Maintainer": "Euyhyun Lee <e4lee@ucsd.edu>",
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